Understanding Genetic Condition Status

 

 Genetic condition status results are based on DNA samples provided by breeders. Herefords Australia makes no statements, representations or warranties about the accuracy or completeness of any information relating to the status of a particular animal: and disclaims all responsibility for information and all liability (including without limitation, liability in negligence) for all expenses, losses, damages, and costs you may incur as a result of information being inaccurate or incomplete in any way for any reason.

 

Genetic condition status results are only displayed for animals that have been DNA tested for a particular genetic condition or in circumstances where sufficient DNA testing has been conducted on animals within the pedigree to make some assertions as to genetic condition status. In cases where the genetic condition status of an animal is unknown, no genetic condition status will display for the animal. 

 

Code Explanation

(First two or four characters vary with the genetic condition – i.e. HY, DL, IE, MSUD or MD)

 

_ _F

Indicates that the sample submitted for this animal has been tested and found to be free of the causative mutation responsible for the indicated genetic condition. This animal is homozygous free, meaning that it has two copies of the normal variant (or allele) of the gene.

_ _C

Indicates that the sample submitted for this animal has been tested and found to be a carrier of the causative mutation responsible for the indicated genetic condition. This animal is heterozygous for the mutation, meaning that it has one mutant allele and one normal allele. This animal could pass the mutation to approximately half of its progeny.

_ _A

Indicates that the sample submitted for this animal has been tested and found to possess two copies of the mutant variant of the gene. This animal is homozygous for the mutation responsible for the genetic condition and in the case of HY & IE, will be affected by the genetic condition. In the case of DL, the animal will appear normal but will pass the mutation to 100% of its progeny.

_ _  _%

Indicates that, based on pedigree information supplied by the breeder of the animal, the animal has a chance to be a carrier of the mutation responsible for the described genetic condition but has not been tested. The higher the indicated percentage, the larger the chance the animal may be a carrier. To verify the status of this animal, it is recommended that testing be undertaken prior to using this animal for breeding purposes.

_ _FU

Indicates that, this animal has not been tested for the causative mutation but that both the recorded sire and dam have either been tested and found to be free, or have a status of _ _FU and are expected to be free of the causative mutation responsible for the genetic condition. Herefords Australia gives no guarantee as to the animal's genetic condition status.

 

 

 

 Understanding Genetic Conditions

 

Further details regarding each genetic condition is provided below.

 

Hypotrichosis (HY) - Partial to almost complete lack of hair. Affected calves are often born with very short, fine, kinky hair that may fall out leaving bare spots or areas particularly susceptible to rubbing. The condition may vary in expression as the animal matures and is usually less noticeable in older animals. The coat hair colour will sometimes appear "frosted" or "silverish." The tail switch may also be underdeveloped. Hypotrichosis is caused by a recessive allele which means that affected calves will only occur when two carrier animals are mated together. Hypotrichosis has been reported in the Hereford breed for many decades and is non-lethal.

 

Dilutor (DL) - This is a coat colour abnormality that can be found when a Hereford bull that is a carrier of the dilutor gene is mated to a black cow. A certain number of the resulting calves are born with grey, smokey or chocolate coats (approx. 50%). Diluter is not an abnormality that causes any issues with calf performance. Dilutor is caused by a dominant allele, which means calves that are expected to have a black coat colour are born with a smoke colour coat because the dilutor allele is dominant to the black allele.

 

Idiopathic Epilepsy (IE) - Age of onset of first seizure can be variable, ranging from birth to several months of age. Occurrence and persistence of seizures may be influenced by environmental stress factors such as temperature extremes or increased physical activity. Upon initial onset of seizure episodes, individuals will typically lie on their side with all limbs extended in a rigid state. Manual flexing of the limbs is possible but return to the extended position occurs after release. Seizure episodes may last from several minutes to more than an hour. Idiopathic Epilepsy can lead to death and affected animals have not been known to reproduce. Idiopathic Epilepsy is caused by a recessive allele which means that affected calves will only occur when two carrier animals are mated together.

 

Maple Syrup Urine Disease (MSUD) – This is a condition which has been identified in both horned and polled Hereford animals. Affected calves display severe neurological signs within the first week of life. Typically, affected calves are dull and will become recumbent by 2 to 4 days of age. Affected calves will enter a state of terminal opisthotonus, where severe muscle spasms will cause their head, neck and spinal column to present in an “arching” position. Maple Syrup Urine Disease is fatal, with affected animals tending to die as young calves before they are old enough to reproduce. Maple Syrup Urine Disease is caused by a recessive allele which means that affected calves will only occur when two carrier animals are mated together.      

 

Mandibulofacial Dysostosis (MD) – This condition may result in a facial malformation, which can include cleft palate, brachygraphic (short jaw) and camplygnathia (crooked jaw or face). Affected calves could display bilateral skin tags, attached to an unusual bone formation, just behind the corner of the mouth. Additional skin tags may be present near and/or below the ears. The calves’ ears are sometimes small and floppy.  

 

 

Jaw muscles are underdeveloped, and calves may have an elongated oral opening giving them the appearance of an exaggerated smile. Affected calves have a sucking reflex but will not suckle vigorously; calves that display additional cleft palate and/or shortened or crooked jaws will be further debilitated. While affected calves are typically born alive, they are not able to thrive. Mandibulofacial Dysostosis is caused by a recessive allele which means that affected calves will only occur when two carrier animals are mated together.     

 

 

Putting Undesirable Genetic Conditions into Perspective

 

 All breeds of cattle, in fact all mammals including humans, have undesirable genetic conditions. Fortunately, advances in molecular genetics have facilitated the development of DNA tests for their management. Breed Societies are at the forefront of development of strategies to manage undesirable genetic conditions and seedstock members are leading the industry with their uptake of this technology.

 

How are the conditions inherited?

Research in the U.S.A. and Australia indicates that HY, IE, MSUD, MD and DL have different modes of inheritance. HY, IE, MSUD and MD are simply inherited recessive conditions, whereas DL is caused by a dominant allele.

 

Inheritance of HY, IE, MSUD & MD

Hypotrichosis, Idiopathic Epilepsy, Maple Syrup Urine Disease and Mandibulofacial Dysostosis are simply inherited autosomal recessive conditions. This means that a single pair of genes controls each condition. For this mode of inheritance two copies of the undesirable gene need to be present before the condition is seen; in which case you may get a calf with HY, IE, MSUD or MD.

 

Animals with only one copy of the undesirable gene (and one copy of the normal form of the gene), that appear normal, are known as “carriers”.

 

What happens when carriers are mated to other animals?

A carrier will, on average, pass the undesirable gene form to a random half (50 %) of their progeny.

When a carrier bull and carrier cow are mated:

·     There is a 25% chance that the progeny produced will have two normal genes and so will never pass on the undesirable gene.

·     There is a 50% chance that the mating will produce a carrier.

·     There is a 25% chance that the progeny will inherit two copies of the undesirable gene and hence be affected by the genetic condition.

 

 

When a carrier animal is mated to an animal tested free of the genetic condition:

·     All progeny will appear normal and will be unaffected by the condition.

·     There is a 50% chance that the mating will produce a carrier.

·     There is a 50% chance that the progeny produced will have two normal genes and so will never pass on the undesirable gene.

Note that an animal that is tested free by DNA test of the genetic condition will not pass the genetic condition to its descendants, even if it has carriers in its own ancestry. Therefore, DNA-tested free animals can be used in your breeding program with confidence that they are not transmitting the unfavourable gene to subsequent generations.

 

Inheritance of DL

Dilutor is caused by a dominant allele, which means for this mode of inheritance calves that are expected to have a black coat colour will be affected by the condition if they inherit one or more copies of the undesirable gene.

The condition will never be expressed in purebred Hereford animals, meaning that carrier animals may appear normal but possess either one or two copies of the undesirable gene.

 

What happens when carriers are mated to other animals?

An animal carrying one copy of the undesirable gene will, on average, pass the undesirable gene form to a random half (50%) of their progeny. An animal carrying two copies of the undesirable gene will pass the undesirable gene to 100% of their progeny.

When a carrier animal is mated to an animal expected to produce progeny with a black coat colour (e.g. Angus or Fresian animals):

·    In cases where the carrier animal possesses one undesirable gene, there is a 50% chance that the mating will produce an animal affected by the condition.

·    In cases where the carrier animal possesses two undesirable genes, there is a 100% chance that the mating will produce an animal affected by the condition.

When a carrier animal is mated to a purebred Hereford animal tested free of the genetic condition:

·     All progeny will appear normal and will be unaffected by the condition.

·     In cases where the carrier animal possesses one undesirable gene, there is a 50% chance that the mating will produce a carrier.

·     In cases where the carrier animal possesses two undesirable genes, there is a 100% chance that the mating will produce a carrier.

 

 

 

When a carrier animal is mated is mated to a purebred Hereford animal that is also a carrier of the genetic condition:

·     All progeny will appear normal and will be unaffected by the condition.

·     In cases where both carrier animals possess one undesirable gene, there is a 75% chance that the mating will produce a carrier.

·     In cases where either of the carrier animals possesses two undesirable genes, there is a 100% chance that the mating will produce a carrier.

 

 

As with HY, IE, MSUD and MD, an animal that is tested free by DNA test of the genetic condition will not pass the genetic condition to its descendants, even if it has carriers in its own ancestry.

 

 

How should genetic conditions be managed?

There are a range of educational resources available that aid in the management of genetic conditions from the Southern Beef Technology Services (SBTS) website.

·         A Technical Note titled “Managing Genetic Conditions” is available.   http://sbts.une.edu.au/pdfs/Managing%20Genetic%20Conditions.pdf 

·       A video presentation of a webinar that was delivered as part of the “Know Your Genes” webinar course is available.

      http://sbts.une.edu.au/Webinars/webinars.html