WAGYU (TRIAL) BREEDPLAN

Understanding the EBVs, Selection Indexes and Accuracy

 

Background

The Australian Wagyu Association (AWA) has been proactive in getting a genetic evaluation for Wagyu animals.  The AWA sees genetic evaluation as a major step in breed development.  While there is only limited data available at present, the AWA is hopeful that a trial analysis will be a stepping stone to achieve this aim.

For the October 2009 analysis, there were eleven herds that had submitted performance data.  The analysis included approximately 2400 gestation length records, 7500 birth weights, 8700 animals with a weaning and/or later weight, 1000 bulls with a scrotal measurement and 3200 animals scanned for carcase traits. From a genetic evaluation perspective, this is considered a small data set and should be considered as being a preliminary analysis for the breed.

The EBVs reported for the “carcase traits” are explained in detail below.  It should be noted that there was no abattoir carcase data used in this trial analysis. While the AWA and its members are strongly focused on the abattoir carcase information, there was very little available that was useful for a genetic evaluation.  As such, only live animal ultrasound scan data has been used to calculate the carcase EBVs. 

The AWA is looking to build a database of Wagyu infused animals that have been performance recorded for a range of traits, including weights from birth to slaughter, live animal ultrasound scans, abattoir carcase and fertility information.  If you would like to participate in this project, please contact the AWA direct.


EBVs

An animal's breeding value is its genetic merit, half of which will be passed on to its progeny.  While we will never know the exact breeding value, for performance traits it is possible to make good estimates.  These estimates are called Estimated Breeding Values (EBVs). 

In the calculation of EBVs, the performance of individual animals within a contemporary group is directly compared to the average of other animals in that group.  A contemporary group consists of animals of the same sex and age class within a herd, run under the same management conditions and treated equally.  Indirect comparisons are made between animals reared in different contemporary groups, through the use of pedigree links between the groups.

EBVs are expressed in the units of measurement for each particular trait.  They are shown as positive or negative differences between an individual animal's genetics difference and the genetic base to which the animal is compared.  For example, a bull with an EBV of +50 kg for 600-Day Weight is estimated to have genetic merit 50 kg above the breed base of 0 kg.  Since the breed base is set to an historical benchmark, the average EBVs of animals in each year drop has changed over time as a result of genetic progress within the breed.

The absolute value of any EBV is not critical, but rather the differences in EBVs between animals.  Particular animals should be viewed as being "above or below breed average" for a particular trait. 

Whilst EBVs provide the best basis for the comparison of the genetic merit of animals reared in different environments and management conditions, they can only be used to compare animals analysed within the same analysis.  Consequently, Wagyu BREEDPLAN EBVs cannot be validly compared with EBVs for any other breed.

EBVs are potentially available for a range of traits covering fertility, calving ease, milking ability, growth, carcase merit and docility.  The EBVs available for Wagyu are outlined below. When using EBVs to assist in selection decisions it is important to achieve a balance between the different groups of traits and to place emphasis on those traits that are important to the particular herd, markets and environment.  One of the advantages of having a comprehensive range of EBVs is that it is possible to avoid extremes in particular traits and select for animals with balanced overall performance.

 

Gestation Length EBV (days) is an estimate of the time from conception (AI date) to the birth of the calf and is based on Artificial Insemination and hand mating records.  Lower (negative) Gestation Length EBVs indicate shorter gestation length and therefore potentially easier calving and increased growth after birth.

Birth Weight EBV (kg) is based on the measured birth weight of progeny, adjusted for dam age.  The lower the value the lighter the calf at birth and the lower the likelihood of a difficult birth.  This is particularly important when selecting sires for use over heifers.

200-Day Growth EBV (kg) is calculated from the weight of progeny taken between 80 and 300 days of age.  Values are adjusted to 200 days and for age of dam.  This EBV is the best single estimate of an animal's genetic merit for growth to early ages.

400-Day Weight EBV (kg) is calculated from the weight of progeny taken between 301 and 500 days of age, adjusted to 400 days and for age of dam.  This EBV is the best single estimate of an animal's genetic merit for yearling weight.

600-Day Weight EBV (kg) is calculated from the weight of progeny taken between 501 and 900 days of age, adjusted to 600 days and for age of dam.  This EBV is the best single estimate of an animal's genetic merit for growth beyond yearling age.

Mature Cow Weight EBV (kg) is based on the cow weight when the calf is weighed for weaning, adjusted to 5 years of age.  This EBV is an estimate of the genetic difference in cow weight at 5 years of age and is an indicator of growth at later ages and potential feed maintenance requirements of the females in the breeding herd.  Steer breeders wishing to grow animals out to a larger weight may also use the Mature Cow Weight EBV.

Milk EBV (kg) is an estimate of an animal's milking ability.  For sires, this EBV indicates the effect of the daughter's milking ability, inherited from the sire, on the 200-day weights of her calves.  For dams, it indicates her milking ability.

Scrotal Size EBV (cm) is calculated from the circumference of the scrotum taken between 300 and 700 days of age and adjusted to 400 days of age.  This EBV is an estimate of an animal's genetic merit for scrotal size.  There is also a small negative correlation with age of puberty in female progeny and therefore selection for increased scrotal size will result in reduced age at calving of female progeny.

Eye Muscle Area EBV (sq cm) is calculated from measurements from live animal ultrasound scans only at this stage. The scan is adjusted to a standard 500 days of age.  This EBV estimates genetic differences in scanned eye muscle area at the 12/13th rib site of a 500 day old animal.  More positive EBVs indicate larger eye muscles for animals with similar 400/600 day weight EBVs.  That is, as animals get bigger, we expect their EMAs to increase as well.  Hence, for animals with similar growth EBVs, more positive EMA EBVs indicate more muscling.  Sires with relatively higher Eye Muscle Area EBVs are expected to produce better muscled and higher percentage yielding progeny at the same 400/600 day weight EBV than will sires with lower Eye Muscle Area EBVs.

Rib Fat and Rump Fat EBVs (mm) are calculated from measurements of subcutaneous fat depth scanned at the 12/13 rib site and the P8 rump site (from live animal ultrasound scans) and are adjusted to a standard 500 days of age.  These EBVs are indicators of the genetic differences in fat distribution on a 500 day old animal.  Sires with low, or negative, fat EBVs are expected to produce leaner progeny at 500 days than will sires with higher EBVs.

Intramuscular Fat EBV (%) is an estimate of the genetic difference in the percentage of scanned intramuscular fat (marbling) at the 12/13th rib site in a 500 day old animal. Larger more positive values are more favourable  Due to technical limitations of the current ultrasound scanning equipment and the techniques to analyse the ultrasound images, live animal scanning is limited to animals that have less than 8% intra muscular fat – which is roughly equivalent to a marble score 2 in AusMEAT terminology.  As such, there is likely to be observed differences between an early feedlot scan and later marble scores from the carcase when slaughtered 200 or more days later.  Research has shown that there is a reasonable relationship between scan data and carcase measures for other cattle breeds.  However, this relationship has not yet been determined for Wagyu infused cattle.  The AWA is looking at running trials to estimate this relationship for Wagyu infused cattle.

Selection Indexes

Wagyu selection indexes are currently under development and will be available soon.

Indexes are reported as an EBV, in units of relative earning capacity ($’s) for a given market.  They reflect both the short-term profit generated by a sire through the sale of his progeny, and the longer-term profit generated by his daughters retained for breeding in a sustainable cow herd.  Both costs, including feeding,  and returns from throughout the production system are accounted for.

The Indexes are derived using BreedObject technology.  For more information on this technology, go to the BreedObject web site.

Accuracy

Accuracy (%) is based on the amount of performance information available on the animal and its close relatives - particularly the number of progeny analysed.  Accuracy is also based on the heritability of the trait and the genetic correlations with other recorded traits.  Hence accuracy indicates the "confidence level" of the EBV.  The higher the accuracy value the lower the likelihood of change in the animal's EBV as more information is analysed for that animal or its relatives.  Even though an EBV with a low accuracy may change in the future, it is still the best estimate of an animal's genetic merit for that trait.  As more information becomes available, an EBV is just as likely to increase in value, as it is to decrease.

Accuracy values range from 0-99%.  The following guide is given for interpreting accuracy:

Accuracy range

 Interpretation

less than 50%

 Low accuracy.  EBVs are preliminary and could change substantially as more performance information becomes available.

 50-74%

 Medium accuracy, usually based on the animal's own records and pedigree.

 75-90%

 Medium-high accuracy.  Some progeny information included.  EBVs may change with addition of more progeny data.

 more than 90%

 High accuracy estimate of the animal's true breeding value.

As a rule, animals should be compared on EBVs regardless of accuracy.  However, where two animals have similar EBVs the one with higher accuracy could be the safer choice, assuming other factors are equal. 

For further information please contact the Australian Wagyu Association or Wagyu BREEDPLAN